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dc.contributor.authorWilson, Claire L
dc.contributor.authorMiller, Crispin J
dc.date.accessioned2009-07-24T15:42:48Z
dc.date.available2009-07-24T15:42:48Z
dc.date.issued2005-09-15
dc.identifier.citationSimpleaffy: a BioConductor package for Affymetrix Quality Control and data analysis. 2005, 21 (18):3683-5 Bioinformaticsen
dc.identifier.issn1367-4803
dc.identifier.pmid16076888
dc.identifier.doi10.1093/bioinformatics/bti605
dc.identifier.urihttp://hdl.handle.net/10541/75639
dc.description.abstractSUMMARY: Quality Control is a fundamental aspect of successful microarray data analysis. Simpleaffy is a BioConductor package that provides access to a variety of QC metrics for assessing the quality of RNA samples and of the intermediate stages of sample preparation and hybridization. Simpleaffy also offers fast implementations of popular algorithms for generating expression summaries and detection calls. AVAILABILITY: Simpleaffy can be downloaded from http://www.bioconductor.org. SUPPLEMENTARY INFORMATION: Additional information can be found on the supplementary website located at http://bioinformatics.picr.man.ac.uk.
dc.language.isoenen
dc.subject.meshComputational Biology
dc.subject.meshComputer Graphics
dc.subject.meshComputer Simulation
dc.subject.meshDatabase Management Systems
dc.subject.meshGene Expression Profiling
dc.subject.meshHumans
dc.subject.meshInformation Storage and Retrieval
dc.subject.meshInternet
dc.subject.meshNucleic Acid Hybridization
dc.subject.meshOligonucleotide Array Sequence Analysis
dc.subject.meshQuality Control
dc.subject.meshRNA
dc.subject.meshSequence Analysis, DNA
dc.subject.meshSoftware
dc.subject.meshStatistics as Topic
dc.subject.meshUser-Computer Interface
dc.titleSimpleaffy: a BioConductor package for Affymetrix Quality Control and data analysis.en
dc.typeArticleen
dc.contributor.departmentPaterson Institute for Cancer Research, Manchester M20 4BX, UK.en
dc.identifier.journalBioinformaticsen
html.description.abstractSUMMARY: Quality Control is a fundamental aspect of successful microarray data analysis. Simpleaffy is a BioConductor package that provides access to a variety of QC metrics for assessing the quality of RNA samples and of the intermediate stages of sample preparation and hybridization. Simpleaffy also offers fast implementations of popular algorithms for generating expression summaries and detection calls. AVAILABILITY: Simpleaffy can be downloaded from http://www.bioconductor.org. SUPPLEMENTARY INFORMATION: Additional information can be found on the supplementary website located at http://bioinformatics.picr.man.ac.uk.


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